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  • 若林
  • 中島
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  • 大隅
  • 冨永
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  • 公募



  • Shibue R, and Komaki F. Firing rate estimation using infinite mixture models and its application to neural decoding. Journal of Neurophysiology, 118, 2902–2913, 2017.
  • Maekawa M, Watanabe A, Iwayama Y, Kimura T, Hamazaki, K, Balan S, Ohba H, Hisano Y, Nozaki Y, Ohnishi T, Toyoshima M, Shimamoto C, Iwamoto K, Bundo M, Osumi N, Takahashi E, Takashima A. and Yoshikawa T: Polyunsaturated fatty acid deficiency during neurodevelopment in mice models the prodromal state of schizophrenia through epigenetic changes in nuclear receptor genes.. Transl Psychiatry. 7, 9, e1229, 2017.
  • Blume M, Inoguchi F, Sugiyama T, Owada Y, Osumi N, Aimi Y, Taki K, Katsuyama Y: Dab1 contributes differently to the morphogenesis of the hippocampal subdivisions. Dev Growth Differ. 59, 8, 657-673, 2017.
  • Zhu Y, Uezono N, Yasui T, Nakashima K: Neural stem cell therapy aiming at better functional recovery after spinal cord injury. Dev Dyn, in press.
  • Kameda T, Imamura T, Nakashima K: Epigenetic regulation of neural stem cell differentiation towards spinal cord regeneration. Cell Tissue Res, in press.
  • Kimura A, Matsuda T, Sakai A, Murao N, Nakashima K: HMGB2 expression is associated with transition from a quiescent to an activated state of adult neural stem cells. Dev Dyn, 2017.
  • Honda M, Nakashima K, Katada S: PRMT1 regulates astrocytic differentiation of embryonic neural stem/precursor cells. J Neuochem 142, 6, 901-907, 2017.
  • Sanosaka T, Imamura T, Hamazaki N, Chai M, Igarashi K, Ideta-Otsuka M, Miura F, Ito T, Fujii N, Ikeo K, Nakashima K: DNA Methylome Analysis Identifies Transcription Factor-Based Epigenomic Signatures of Multilineage Competence in Neural Stem/Progenitor Cells. Cell Rep 20, 12, 2992-3003, 2017.
  • Yasui T, Uezono N, Nakashima H Noguchi H, Matsuda T, Noda-Andoh T, Okano H, Nakashima K: Hypoxia epigenetically confers astrocytic differentiation potential on human pluripotent cell-derived neural precursor cells. Stem Cell Reports 8, 6, 1743-1756, 2017.
  • Brulet R, Matsuda T, Zhang L, Miranda C, Giacca M, Kaspar BK, Nakashima K, Hsieh J: NEUROD1 instructs neuronal conversion in non-reactive astrocytes. Stem Cell Reports 8, 6, 1506-1515, 2017.
  • Takouda J, Katada S, Nakashima K: Emerging mechanisms underlying astrogenesis in the developing mammalian brain. Proc Jpn Acad Ser B Phys Biol Sci 93, 6, 386-398, 2017.
  • Hamazaki N, Nakashima K, Hayashi K, Imamura T: Detection of bidirectional promoter-derived lncRNAs from small-scale samples using pre-amplification-free directional RNA-seq method. Methods Mol Biol 1605, 0, 85-103, 2017.
  • Hamazaki N, Nakashima K, Imamura T: Manipulation of promoter-associated noncoding RNA in mouse early embryos for controlling sequence-specific epigenetic status. Methods Mol Biol 1534, 0, 271-282, 2017.
  • Uesaka M, Agata K, Oishi T, Nakashima K, Imamura T: Evolutionary acquisition of promoter-associated non-coding RNA (pancRNA) repertoires diversifies species-dependent gene activation mechanisms in mammals. BMC Genomics 18, 1, 285, 2017.
  • Miyashita S, Adachi T, Yamashita M, Sota T, Hoshino M: Dynamics of the cell division orientation of granule cell precursors during cerebellar development. Mech Dev, 147, 1-7, 2017.
  • Hori K, Hoshino M: Neuronal Migration and AUTS2 Syndrome. Brain Sci, 7, 5, E54, 2017.
  • Hanai S, Sukigara S, Dai H, Owa T, Horike SI, Otsuki T, Saito T, Nakagawa E, Ikegaya N, Kaido T, Sato N, Takahashi A, Sugai K, Saito Y, Sasaki M, Hoshino M, Goto YI, Koizumi S, Itoh M: Pathologic Active mTOR Mutation in Brain Malformation with Intractable Epilepsy Leads to Cell-Autonomous Migration Delay. Am J Pathol, 187, 5, 1177-1185, 2017.
  • Fukuda K, Inoguchi Y, Ichiyanagi K, Ichiyanagi T, Go Y, Nagano M, Yanagawa Y, Takaesu N, Ohkawa Y, Imai H, Sasaki H: Evolution of the sperm methylome of primates is associated with retrotransposon insertions and genome instability. Hum Mol Genet 26, 18, 3508-3519, 2017.
  • Matsuda T, Komaki F: Multivariate time series decomposition into oscillation components. Neural Computation 29, 8, 2055–2075, 2017.
  • Ujiie Y, Asai Y, Wakabayashi A: Individual Differences and the Effect of Face Configuration Contexts in the McGurk Effect. Experimental Brain (in press)
  • Sakai A, Nakato R, Ling Y, Hou X, Hara N, Iijima T, Yanagawa Y, Kuwano R, Okuda S, Shirahige K, Sugiyama S: Genome-wide target analyses of Otx2 homeoprotein in postnatal Cortex. Front Neurosci 11, 307, 2017.
  • Hiramatsu C, Paukner A, Kuroshima H, Fujita K, Suomi SJ, Inoue-Murayama M: Short poly-glutamine repeat in the androgen receptor in New World monkeys. Meta Gene 14, 1, 105-113, 2017.
  • Hiramatsu C, Melin AD, Allen WL, Dubuc C, Higham JP: Experimental evidence that primate trichromacy is well suited for detecting primate social colour signals. Proceedings of the Royal Society B 284, 20162458, 1-9, 2017.
  • Tsuneoka Y, Yoshida S, Takase K, Oda S, Kuroda M, Funato H: Neurotransmitters and neuropeptides in gonadal steroid receptor-expressing cells in medial preoptic area subregions of the male mouse. Sci Rep 7, 1, 9809, 2017.
  • Ogoh H, Yamagata K, Nakao T, Sandell L L, Yamamoto A, Yamashita A, Tanga N, Suzuki M, Abe T, Kitabayashi I, Watanabe T, Sakai D: Mllt10 knockout mouse model reveals critical role of Af10-dependent H3K79 methylation in midfacial development. Sci Rep 7, (1) 11922, 2017.
  • Inokuchi K, Imamura F, Takeuchi H, Kim R, Okuno H, Nishizumi H, Bito H, Kikusui T, Sakano H: Nrp2 is sufficient to instruct circuit formation of mitral-cells to mediate odour-induced attractive social responses. Nature Communications 8, 15977, 2017.
  • Saito H, Nishizumi H, Suzuki S, Matsumoto H, Ieki N, Abe T, Kiyonari H, Morita M, Yokota H, Hirayama N, Yamazaki T, Kikusui T, Mori K, Sakano H: Immobility responses are induced by photoactivation of single glomerular species responsive to fox odour TMT. Nature Communications 8, 16011, 2017.
  • Muto Y, *Nishiyama M, Nita A, Moroishi T, *Nakayama KI: FBXL5-mediated cellular iron homeostasis in maintenance of hematopoietic stem cells. Nat Commun 8, 16114, 2017. (*Co-corresponding author)
  • Yamauchi T, *Nishiyama M, Moroishi T, Kawamura A, *Nakayama KI: FBXL5 inactivation in mouse brain induces aberrant proliferation of neural stem progenitor cells. Mol Cell Biol 37, 8, e00470-16, 2017. (*Co-corresponding author)
  • Watabe AM: 味覚による快・不快情動の制御機構. 日本味と匂学会誌 24, 2, 81-86, 2017.
  • Shinohara K, Watabe AM, Nagase M, Okutsu Y, Takahashi Y, Kurihara H, Kato F: Essential Role of Endogenous Calcitonin Gene-Related Peptide in Pain-associated Plasticity in the Central Amygdala. European Journal of Neuroscience 46, 6, 2149-2160, 2017.
  • Kobayashi K: Activity modifies adult brain maturity. Oncotarget 8, 29, 46708-46709, 2017.
  • Kwon T*, Sakamoto M* (Co-first author), Peterka D.S, Yuste R: Attenuation of Synaptic Potentials in Dendritic Spines. Cell Reports 20, 5, 1100-1110, 2017.
  • Takemoto-Kimura S, Suzuki K, Horigane SI, Kamijo S, Inoue M, Sakamoto M, Fujii H, Bito H: Calmodulin kinases: essential regulators in health and disease. Journal of Neurochemistry 141, 6, 808-818, 2017.
  • Aoki Y, Nishimura Y, Hondrich T, Nakayama R, Igata H, Sasaki T, Ikegaya Y: Selective attenuation of electrophysiological activity of the dentate gyrus in a social defeat mouse model. J Physiol Sci 4, 67, 507-513, 2017.
  • Sasaki T, Nishimura Y, Ikegaya Y: Simultaneous recordings of central and peripheral bioelectrical signals in a freely moving rodent. Biol Pharm Bull 40, 5, 711-715, 2017.




  • 河村 康佑・若林明雄: 他者の痛み経験時の事象と表情が観察者の痛み理解と不快感に与える影響. 認知心理学研究15, 1, 13-19. 2017.
  • Hamazaki N, Nakashima K, Imamura T: Manipulation of Promoter-Associated Noncoding RNAs in Mouse Early Embryos for Controlling Sequence-Specific Epigenetic Status. Methods Mol Biol 1543, 271-282, 2017.
  • Noguchi H, Kimura A, Murao N, Namihira M. Nakashima K: Prenatal deletion of DNA methyltransferase 1 in neural stem cells impairs neurogenesis and causes anxiety-like behavior in adulthood. Neurogenesis (Austin) 3, e1232679, 2016.
  • Hikabe O, Hamazaki N, Nagamatsu G, Obata Y, Hirao Y, Hamada N, Shimamoto S, Imamura T, Nakashima K, Saitou M, Hayashi K: Reconstitution in vitro of the entire cycle of the mouse female germ line. Nature 539, 299-303, 2016.
  • Morita S., Noguchi H., Horii T., Nakabayashi K., Kimura M., Okamura K., Sakai A., Nakashima H, Hata K, Nakashima K. Hatada I: Targeted manipulation of DNA methylation in vivo using CRISPR/Cas9 and a repeating peptide array-based amplification. Nat Biotechnol 34, 1060-1065, 2016.
  • Irie K, Tsujimura K, Nakashima H, *Nakashima K: MicroRNA-214 promotes dendritic development by targeting the schizophrenia-associated gene Quaking. J Biol Chem 291, 13891-13904, 2016 (*shared correspondence).
  • Murao N, Noguchi H, *Nakashima K: Epigenetic regulation of neural stem cell property from embryo to adult. Neuroepigenetics 5, 1-10, 2016
  • Noguchi H, Murao N, Kimura A, Matsuda T, Namihira M, Nakashima K: DNA methyltransferase 1 is indispensable for development of the hippocampal dentate gyrus. J Neurosci 36, 6050-6068, 2016.
  • Yamamoto N, Agata K, Nakashima K, Imamura T: Bidirectional promoters link cAMP signaling with irreversible differentiation through promoter-associated non-coding RNA (pancRNA) expression in PC12 cells. Nucleic Acids Res 44, 5105-5122, 2016.
  • Amano M, Nishioka T, Yura Y, Kaibuchi K: Identification of Protein Kinase Substrates by the Kinase-Interacting Substrate Screening (KISS) Approach. Curr Protoc Cell Biol, 72:14.16.1-14.16.12, 2016.
  • Inoue YU, Inoue T: Brain enhancer activities at the gene-poor 5p14.1 autism-associated locus. Sci Rep, 6, 31227, 2016.
  • Egusa SF, Inoue YU, Asami J, Terakawa YW, Hoshino M, Inoue T: Classic cadherin expressions balance postnatal neuronal positioning and dendrite dynamics to elaborate the specific cytoarchitecture of the mouse cortical area. Neurosci Res, 105:49-64, 2016.
  • Kikkawa T, Takahashi M and Osumi N: Electroporation in the Rodent Embryonic Brain Using Whole Embryo Culture System. Curr Protoc Neurosci. 78:3. 30. 1-3. 30. 16, 2017.
  • Yoshizaki K, Furuse T, Kimura R, Tucci V, Kaneda H, Wakana S and Osumi N: Paternal Aging Affects Behavior in Pax6 Mutant Mice: A Gene/Environment Interaction in Understanding Neurodevelopmental Disorders. PLoS One. 11(11), e0166665, 2016.
  • Lo Van A, Sakayori N, Hachem M, Belkouch M, Picq M, Lagarde M, Osumi N, Bernoud-Hubac N: Mechanisms of DHA transport to the brain and potential therapy to neurodegenerative diseases. Biochimie. 130, 163-167, 2016.
  • Sakayori N, Tokuda H, Yoshizaki K, Kawashima H, Innis SM, Shibata H and Osumi N: Maternal nutritional imbalance between linoleic acid and alpha-linoleic acid increase offspring's anxious behavior with a sex-dependent manner in mice. Tohoku J Exp Med. 240(1), 31-37, 2016.
  • Yoshida K, Go Y, Kushima I, Toyoda A, Fujiyama A, Imai H, Saito N, Iriki A, Ozaki N, Isoda M: Single-neuron and genetic correlates of autistic behavior in macaque. Genome Research 26, 3, 301-314, 2016.
  • Carelli FN, Hayakawa T, Go Y, Imai H, Warnefors M, Kaessmann H: The life history of retrocopies illuminates the evolution of new mammalian genes. Genome Research, 26, 3, 301-314, 2016.
  • Hiroshi Yoshimura , Tokio Sugai, Nobuo Kato, Takashi Tominaga, Yoko Tominaga, Takahiro Hasegawa, Chenjuan Yao, Tetsuya Akamatsu:Interplay between non-NMDA and NMDA receptor activation during oscillatory wave propagation: Analyses of caffeine-induced oscillations in the visual cortex of rats. Neural Networks 79, 141-149, 2016.
  • Matsuda T, Kitajo K, Yamaguchi Y, and Komaki F: A point process modeling approach for investigating the effect of online brainactivity on perceptual switching NeuroImage, 152, 50–59, 2017.
  • Matsuda T and Komaki F: Time series decomposition into oscillation components and phase estimation. Neural Computation, 29, 332-367, 2017.